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Table 4 Tested novel motifs with mutagenesis

From: Uncovering mechanisms of transcriptional regulations by systematic mining of cis regulatory elements with gene expression profiles

Motif

Occurrence

number

p-value

Gene

symbol

Fold change

Ratio

Gene description

Known nearby Transcriptional

factor binding sites

gcggaggc

1238

2.57E-06

pck2

0.2

Phosphoenol-pyruvate

carboxykinase 2

(mitochondrial)

Oct-1, TFIIA

cgacccgt

95

3.60E-06

myog

5.2

myogenin

SREBP-1, MEF2, MEF3

  1. Novel motifs tested with mutagenesis and their surrounding known transcriptional factor binding sites.