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Figure 1 | BioData Mining

Figure 1

From: ExpressionData - A public resource of high quality curated datasets representing gene expression across anatomy, development and experimental conditions

Figure 1

Data transformation process from public repositories to unified data queried by GENEVESTIGATOR or to reference datasets available at http://www.expressiondata.org . A. Manual curation of public data, including sample annotation using ontologies, statistical quality control of samples and experiments, and data normalization. B. Storage of high quality standardized expression experiments in the GENEVESTIGATOR database. C. Aggregation of expression data according to categories of anatomical parts, cell lines, neoplasms, perturbations (including diseases, drugs and genotypes) and stages of development. While all datasets are available through GENEVESTIGATOR, selected compilated reference datasets such as for anatomy or development are made publicly available through http://www.expressiondata.org.

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BioData Mining

ISSN: 1756-0381