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Table 6 Top regulators for eQTL-hotspot gene groups predicted by the SPF method in wWormNet

From: On predicting regulatory genes by analysis of functional networks in C. elegans

EQTL

Chrom.

Gene

Function

 

Juvenile worms

 

1

I

K09H9.2,

Endocytosis/

 
  

clec-53

regulation of growth rate

 
  

R12E2.2

  

1

I

W01B11.1

  

1

I

sep-1

Cell division

 

1

I

mis-12

Cell division

 

1

I

Y54E10BR.3

TF/Zn ion binding

 

1

I

Y71F9B.6

  

2

V

fbxa-192

Protein interaction

 

2

V

str-92

  

2

V

T10C6.7

Protein interaction

 

2

V

Y59A8A.3

  

Reproducing worms

 

3

IV

Y55F3BL.2

Metal ion transport

 

3

IV

Y69A2AR.16

Metabolism/oxidoredutase

 

3

IV

Y69A2AR.21

Embrionic development

 

4

V

Y32B12A.5

  

4

V

Y43F8B.13

  

4

V

Y43F8B.14

  

4

V

Y51A2B.4

Lipid metabolism

 

4

V

Y70C5B.1

  

4

V

srh-296

Integral membrane component

 

Old worms

 

5

II

moe-3

RNA binding/iRNA modification

 

5

II

Y17G7B.18

Positive regulation of growth rate/development

 

5

II

cpt-1

Acetyl-transferase/histone modification

 

5

II

csp-1

Caspase/apoptosis

 

5

II

pqn-87

Prion/protein modification

 

6

IV

F15E6.4

  

6

IV

F28F9.3

  

6

IV

T08B6.4

  

6

IV

Y9C9A.1

Structural element of vitelline membrane

 

7

IV

C17H12.12

Protein binding

 

7

IV

C17H12.5

Tyrosine phosphatase

 

7

IV

C31H1.1

  

7

IV

F36H12.5

  

7

IV

F38A5.6

  

7

IV

ZK354.3

  

8

V

Y38H6C.15

  

8

V

Y38H6C.18

  

8

V

tgt-2

Queuine tRNA-ribosyltransferase activity modification

 

8

V

T26E4.10

Lipid storage

 

8

V

T26F2.2

  

8

V

sri-7

Integral membrane component

 

8

V

nhr-218

TF,steroid hormon receptor

 

8

V

str-151

Integral membrane component

 

8

V

nhr-269

TF,steroid hormon receptor

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