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Table 8 Execution times of MBMDR-4.2.2. The parallel workflow was tested on a 256-core computer cluster (Intel L5420 2.5 GHz). The sequential executions were performed on a single core of this cluster

From: gammaMAXT: a fast multiple-testing correction algorithm

SNPs

MBMDR-4.2.2

MBMDR-4.2.2

MBMDR-4.2.2

MBMDR-4.2.2

 

Binary trait

Binary trait

Continuous trait

Continuous trait

 

sequential execution

parallel workflow

sequential execution

parallel workflow

103

13 min 33 sec

20 sec

13 min 18 sec

18 sec

104

52 min 15 sec

1 min 05 sec

56 min 14 sec

53 sec

105

64 h 35 min

22 min 15 sec

70 h 03 min

20 min 28 sec

106

≈ 270 days

25 h 12 min

≈ 290 days

24 h 06 min

  1. The results prefixed by the symbol “ ≈” are extrapolated