Table 6 Average ranks based on the Enrichment Score for the best performing networks of each inference method
From: Functional networks inference from rule-based machine learning models
Category | FuNeL | Pearson | ARACNE | MIC |
|---|---|---|---|---|
GO BP | C4 (3) | SE(C3) (1.5) | SN(C3) (4) | SN(C3) (1.5) |
GO MF | C3 (3.5) | SN(C3) (3.5) | SN(C3) (2) | SN(C3) (1) |
GO CC | C3 (4) | SN(C1) (3) | SN(C3) (2) | SN(C3) (1) |
Patwhays | C4 (1.5) | SN(C2) (3.5) | SE(C1) (1.5) | SE(C3) (3.5) |
Average | 3 | 2.88 | 2.38 | 1.75 |